edu.uchsc.ccp.iaa
Class IAA

java.lang.Object
  edu.uchsc.ccp.iaa.IAA

public class IAA
extends Object

Constructor Summary

IAA(Set<String> setNames)

IAA(Set<String> setNames, Set<Annotation> annotations)

Method Summary

void	allwayIAA(Class matcherClass)
void	allwayIAA(Matcher matcher)
Map<String,Set<Annotation>>	getAllwayMatches()
Map<Annotation,Set<Annotation>>	getAllwayMatchSets()
Map<String,Set<Annotation>>	getAllwayNonmatches()
Set<String>	getAnnotationClasses()
Map<String,Set<Annotation>>	getAnnotationSets()
Set<Annotation>	getAnnotationsOfClass(String className, String compareSetName)
Set<Annotation>	getAnnotationsOfSameType(Annotation annotation, String compareSetName)
Set<Annotation>	getExactlyOverlappingAnnotations(Annotation annotation, String compareSetName)
Object	getMatcherInfo(String infoLabel)
Map<String,Set<Annotation>>	getNontrivialAllwayMatches()
Map<String,Set<Annotation>>	getNontrivialAllwayNonmatches()
Map<String,Map<String,Set<Annotation>>>	getNontrivialPairwiseMatches()
Map<String,Map<String,Set<Annotation>>>	getNontrivialPairwiseNonmatches()
Set<Annotation>	getOverlappingAnnotations(Annotation annotation, String compareSetName)
Map<String,Map<String,Set<Annotation>>>	getPairwiseMatches()
Map<Annotation,Set<Annotation>>	getPairwiseMatchPairs()
Map<String,Map<String,Set<Annotation>>>	getPairwiseNonmatches()
Set<String>	getSetNames()
Map<String,Set<Annotation>>	getTrivialAllwayMatches()
Map<String,Set<Annotation>>	getTrivialAllwayNonmatches()
Map<String,Map<String,Set<Annotation>>>	getTrivialPairwiseMatches()
Map<String,Map<String,Set<Annotation>>>	getTrivialPairwiseNonmatches()
Set<Annotation>	match(Annotation annotation, Set<Annotation> excludeAnnotations, Matcher matcher, MatchResult matchResult)
void	pairwiseIAA(Class matchClass) This method performs pairwise IAA for each combination of annotators.
void	pairwiseIAA(Matcher matcher)
void	reset()
void	setAnnotations(Set<Annotation> annotations)
void	setMatcherInfo(String infoLabel, Object infoObject)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

IAA

public IAA(Set<String> setNames)

IAA

public IAA(Set<String> setNames,
           Set<Annotation> annotations)

Method Detail

reset

public void reset()

setAnnotations

public void setAnnotations(Set<Annotation> annotations)

allwayIAA

public void allwayIAA(Class matcherClass)
               throws NoSuchMethodException,
                      InstantiationException,
                      IllegalAccessException,
                      InvocationTargetException,
                      IAAException

Throws:

NoSuchMethodException

InstantiationException

IllegalAccessException

InvocationTargetException

IAAException

allwayIAA

public void allwayIAA(Matcher matcher)
               throws IAAException

Throws:

IAAException

pairwiseIAA

public void pairwiseIAA(Class matchClass)
                 throws NoSuchMethodException,
                        InstantiationException,
                        IllegalAccessException,
                        InvocationTargetException,
                        IAAException

This method performs pairwise IAA for each combination of annotators.

Throws:

NoSuchMethodException

InstantiationException

IllegalAccessException

InvocationTargetException

IAAException

pairwiseIAA

public void pairwiseIAA(Matcher matcher)
                 throws IAAException

Throws:

IAAException

match

public Set<Annotation> match(Annotation annotation,
                             Set<Annotation> excludeAnnotations,
                             Matcher matcher,
                             MatchResult matchResult)

getAnnotationsOfSameType

public Set<Annotation> getAnnotationsOfSameType(Annotation annotation,
                                                String compareSetName)

getAnnotationsOfClass

public Set<Annotation> getAnnotationsOfClass(String className,
                                             String compareSetName)

getOverlappingAnnotations

public Set<Annotation> getOverlappingAnnotations(Annotation annotation,
                                                 String compareSetName)

getExactlyOverlappingAnnotations

public Set<Annotation> getExactlyOverlappingAnnotations(Annotation annotation,
                                                        String compareSetName)

getAllwayMatches

public Map<String,Set<Annotation>> getAllwayMatches()

getAllwayNonmatches

public Map<String,Set<Annotation>> getAllwayNonmatches()

getPairwiseMatches

public Map<String,Map<String,Set<Annotation>>> getPairwiseMatches()

getPairwiseNonmatches

public Map<String,Map<String,Set<Annotation>>> getPairwiseNonmatches()

getAnnotationSets

public Map<String,Set<Annotation>> getAnnotationSets()

getSetNames

public Set<String> getSetNames()

getAnnotationClasses

public Set<String> getAnnotationClasses()

setMatcherInfo

public void setMatcherInfo(String infoLabel,
                           Object infoObject)

getMatcherInfo

public Object getMatcherInfo(String infoLabel)

getTrivialAllwayMatches

public Map<String,Set<Annotation>> getTrivialAllwayMatches()

getTrivialAllwayNonmatches

public Map<String,Set<Annotation>> getTrivialAllwayNonmatches()

getTrivialPairwiseMatches

public Map<String,Map<String,Set<Annotation>>> getTrivialPairwiseMatches()

getTrivialPairwiseNonmatches

public Map<String,Map<String,Set<Annotation>>> getTrivialPairwiseNonmatches()

getNontrivialAllwayMatches

public Map<String,Set<Annotation>> getNontrivialAllwayMatches()

getNontrivialAllwayNonmatches

public Map<String,Set<Annotation>> getNontrivialAllwayNonmatches()

getNontrivialPairwiseMatches

public Map<String,Map<String,Set<Annotation>>> getNontrivialPairwiseMatches()

getNontrivialPairwiseNonmatches

public Map<String,Map<String,Set<Annotation>>> getNontrivialPairwiseNonmatches()

getAllwayMatchSets

public Map<Annotation,Set<Annotation>> getAllwayMatchSets()

getPairwiseMatchPairs

public Map<Annotation,Set<Annotation>> getPairwiseMatchPairs()